Charges, radicals, and lone pairs associated with a chemical structure may be drawn as graphical objects separate from the main structure, or as textual characters within an atom label. The preferred forms vary somewhat according to the circumstances
For the most part, charges should be included within an atom label when possible. The positioning of charges within atom labels is discussed in the section on atom labels and other chemically-significant text. Most commonly, a charge will be associated with a single atom within a structure, and including the charge within the label will rarely pose a problem. The use of floating charges should be avoided except when the charge itself is a noteworthy aspect of the structure
RECOMMENDED | RECOMMENDED | RECOMMENDED | AVOID | AVOID |
Charges associated with an atom label that contains a single element symbol plus one or more hydrogen symbols may be included as text within the label or as a separate graphical object. If the charge is represented textually, it should be included in the label after the hydrogen atom(s). If the charge is represented as a separate object, it should be placed adjacent to the symbol of the element that bears the charge in the structure. Separate charge objects may be shown either in circled or uncircled form; the circled form is more visually apparent, and should best be used only in cases where the charge itself is to emphasized. Separate charge objects should preferentially be positioned toward the top-right of the element symbol; however, if there is another element symbol or object already present to the right, the charge may also be positioned above, to the left, or below the atom symbol, whereever there is the most room.
RECOMMENDED | RECOMMENDED | RECOMMENDED |
Charges associated with a an atom in the middle of a contracted atom label must be positioned as separate graphical objects. The charge should preferentially be positioned above the element symbol, but may also be positioned below if there is more room there.
RECOMMENDED |
Like charges, localized radicals may be represented as text within atom labels or as separate graphical objects. Unlike charges, however, radicals are most preferentially represented as separate objects. The positioning of radicals within atom labels is discussed in the section on atom labels and other chemically-significant text. If radicals are positioned as separate graphical objects, they should be positioned close to the element with which they are associated. Unlike charges, radicals should preferentially not be positioned toward the top right of the element symbol, but rather exactly above, below, to the left, or to the right of it.
RECOMMENDED |
As discussed on the section on aromatic rings and other types of electron delocalization, charges, and radicals that are delocalized across several atoms should always be depicted as separate graphical objects centered within the delocalized system.
RECOMMENDED | AVOID | AVOID | AVOID |
Isolated lone pairs should be positioned, like radicals, close to the element with which they are associated. They should normally be positioned exactly above, below, to the left, or to the right of the atom label, with the two dots of the lone pair parallel to the closest side (horizontally if above or below the label, vertically if to the left or the right). Positioning of lone pairs at other angles should be strongly avoided unless it is impossible to do otherwise.
RECOMMENDED | RECOMMENDED |
Lone pairs are also used extensively by the Lewis Convention. Although that convention is very useful for teaching introductory chemistry, its use outside of educational situations is strongly discouraged.
In contrast to formal charges, the partial charge indicators represent unspecified (and usually non-integral) charge values. They are most commonly used as qualitative indicator of electronegativity or electropositivity.
Partial charge indicators may be shown to emphasize the polar nature of certain covalent bonds, to show the charge distribution in a molecule, or to show the atoms participating in hydrogen bonds. The partial charges are designated by symbols δ- and δ+ placed near the atom in question. In neutral molecules that show partial charges, at least one each of the δ- and δ+ symbols must be shown.
RECOMMENDED | RECOMMENDED | RECOMMENDED |
The mixing of formal and partial charges in one structure should be avoided. In particular, it is not acceptable to use partial charge indicators to indicate the distribution of a real net charge via resonance.
RECOMMENDED | RECOMMENDED | NOT ACCEPTABLE |
Partial charge indicators may also be associated with delocalized systems, just as formal charge indicators may be used.
RECOMMENDED |
Finally, I've summarised some properties of charges as found in chemistry, which I think may be used somewhere.
Formal charge |
(Formal) oxidation
number |
Ionic charge | Partial charge | |
No. per structure | Any |
Any (but usually one or two) |
1 |
Any |
Numeral |
Arabic (omitted for 1) |
Roman; Arabic 0 |
Arabic (omitted for 1) | — |
Sign | Any | Positive (default), negative (to be indicated), 0 (to be indicated) | Any one | At least one δ+ and one δ− |
Value | Integer | Integer | Integer | Non-integer (0 < i < 1) |
Sum is equal to | Charge on molecule/group | — | — | Charge on molecule/group* |
Meaning | (Calculated number) |
(Calculated number) | Charge on whole molecule/group | Charge on atom/electronegativity |
Where? |
Atoms in Lewis formulae | Central atom in formulae of
coordination compounds |
Any structural formulae | Any structural formulae |
Use |
Electron accountancy |
Differentiate between similar molecular entities Central atom | To indicate actual charge | To indicate charge distribution |
* This is a purely academic notion: Since the exact values of δ+ /
δ− are not specified, it is impossible to check that
the sum of all the partial charges is equal to the integer charge on the
molecule.