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Scientific Frauds or Errors?

Threads - Severe Acute Respiratory Syndrome, Scientific Fraud/Error

On Wed, 26 Mar 2003, Peter Macinnis wrote:

We all had it wrong.

 GE-Free NZ campaigner Claire Bleakley believes that there may be a  link between food derived from GE products and the Severe Acute  Respiratory Syndrome (SARS)!

Ray replied:

Peter, hmm GE-Free NZ's Claire Bleakley huh?
(I gather you're joking)
Why am I reminded of Piltdown Man, Margaret Mead and Sir Cyril Burt?

If GE food is linked at all, 500 people is a bit of a small sample population from the population of several millions who have eaten GE food.

Peter replied:

No, Ray, this is no joke -- I had it form a NZ GM advocacy group that was spitting chips about it.

> Why am I reminded of Piltdown Man, Margaret Mead and Sir Cyril Burt?

Because they were frauds, like the anti-GM people?  You may very well think that, I could not possibly say that.

peter

who once met Margaret Mead at Mascot -- she asked me the local time and swept on, at which somebody told me who she was;  who has handled the Piltdown skull and the Piltdown cricket bat (again no joke); but who had nothing to do with Cyril Burt.

Damn!  Missed the trifecta again.
Paul Williams added:

I don't know that Margaret Mead was a fraud.
I think that she was gullible in the extreme though. An anthropologist should understand story telling.
Cyril Burt was without question a fraud regarding his 'twin studies'.
Umm... I must take the Piltdown cricket bat as a joke. Were there Piltdown stumps and bails?
Piltdown sledging chronicles perhaps...
The origin of language: "You're useless"; "Can't bowl, can't field" etc.
'Piltdown man had two short legs, a fine slip and a silly mid on' perhaps.
In any case, a yorker was bowled in 'is blockhole.


Peter replied:
> I don't know that Margaret Mead was a fraud.
> I think that she was gullible in the extreme though. An anthropologist
> should understand story telling.
Agreed -- sloppy thinking on my part
> Umm... I must take the Piltdown cricket bat as a joke. Were there
> Piltdown stumps and bails?
NO, IT IS NOT A JOKE!  It was a bone "artefact" which I believe was created by Teilhard de Chardin, to let the Piltdown frauds know they were rumbled, like the tooth he "found".  It was very crude, but rather like a cricket bat, and clearly cut with metal tools.

It was such a poor copy of a cricket bat, it had to be made by an American or a Frenchman, and the French kept dropping hints that it needed to be looked at.  The tooth that Teilhard "found" was coloured in a different way, proving, to my way of thinking, that he was not the original fraud -- there are almost as many suspects for that role as there are for Jack the Ripper, and I advise you not to get me started on that if you are buying the beers :-)

Ray added:

As a part of our training to write a scientific work report over the year, research skills include a study of ethics.

We were given a few examples of historic fraud/error, some of which will be familiar to many, some not so.

No doubt there are lots more.

Chris Lawson remonstrated:

Come now, Peter. There have been confirmed reports that some of the victims of SARS may have had some contact with GE food, or GE refrigerators, or something.

Ian Musgrave wrote:

>We were given a few examples of historic fraud/error, some of which will be
>familiar to many, some not so.

[snip]
 >AAHL -Australian Animal Health Laboratory research into viruses not present
>in Australia. (stopped fortunately)
So when those viruses inevitably reach Australia (like fire ants, small hive beetle,the killer seaweed that we have here in SA), we will have no research with which to combat them. This is the use of the word "fortunately" with which I was previously unaccustomed.
> >Gregor Mendel -he apparently stopped counting his peas when they reached
>the desired number to prove his hypothesis
Fischer thought Mendels ratios were too close to the desired values (for the number of samples) to be collected properly, but it turns out that the biology of these plants means that they do more closely approximate the ideal ratio than one would expect. (Now I'm going to have to dig up the obscure papers that show this). Of course, the boring reality is not so newsworthy as the idea that the pious monk fudged his figures, and so the later revelation is not included in most books.

Chris Lawson, replying to a post by  Kevin Phyland:
> >Gregor Mendel -he apparently stopped counting his peas when
> >they reached the desired number to prove his hypothesis
>I need a bit of clarification here...I still teach Year 10
>students about the theory of Mendelian dominant/recessive
>inheritance...
>
>Does this mean that Mendelian genetic theory is a fraud/error
>or that he got lucky and went with a correct theory and
>doctored his results ( which I will have to admit is very poor
>science)?

I don't know the ins and outs, but my guess is this:

Mendel was not a formally trained scientists, and even if he was, his research took place well before the advent of modern statistical analysis, so I suspect that he thought there was nothing wrong with what he did. Was he a fraud? Definitely not. Did he perpetrate a scientific error? Clearly not, since we now have oodles of research that shows Mendelian inheritance is a real phenomenon, and indeed the most common form of genetic inheritance in sexual species.

Was he lucky? Well that depends on how you look at it. You *could* say that he was lucky because his figures only just achieved what we would nowadays call statistical significance, and by modern standards his research would be considered to be preliminary and in need of confirmation by better studies. On the other hand, since he was just collecting data for his own interest, and since he was obviously only interested in going until he had convinced himself, this means that *whatever* the strength of the association he was looking at, he would end his research just over the cusp of significance. And more to the point, Mendelian inheritance is obvious -- in hindsight. When you know about it, you see it everywhere. In animals, in people's eye colour, in the inheritance patterns of genetic diseases. You don't even need modern scientific apparatus. Unlike quantum theory, Mendelian inheritance *could* have been worked out millennia ago, and it is especially surprising that it wasn't worked out by breeders earlier. So in that since it is clearly one of those intellectual insights that should have been obvious, but nobody thought of it. Like steam power. Even the ancient Greeks had toys that spun under steam, but nobody thought of using it in an industrial sense until the 18th century. So in this sense, the *insight* was all Mendel's, even if his experimental technique left a lot to be desired. And in modern times, if Mendel had published his paper, and it had been confirmed by other researchers, it would still be considered *his* idea. So was he lucky? I don't think so.

(Please note that I have only a passing knowledge of the details of Mendel's findings and all of the above may be a complete crock.)

Peter Macinnis added:

No, there is a bit more to it -- Mendel had run tests and knew what the results ought to be when he repeated them.  I can only recall one case where he could be said to have fudged: he got 2:1 instead of 3:1, said so,
and repeated the experiment, accepting the next set which were 3:1 -- he assumed that the seeds were not what they were supposed to be.

Analysis (by R. A. Fisher, whose photo sits on my desk) showed that Mendel's figures are a bit TOO close to 3:1, given the sample size, suggesting that he or somebody may have fudged.  More importantly, Mendel looked at independent segregation in just seven traits, the same as the number of chromosome pairs in the pea. The traits are all on separate chromosomes, except for two that were on opposite ends, and so more or less assorted randomly.

Values and standards were different then. This was at a time when William Crookes owned a journal and could publish his results without peer review -- let's not jump to contusions!

You can find a bit more on this at
http://www.abc.net.au/science/slab/macinnis/story.htm

Paul Williams answered:

Chris or Ian would know much more on this.
My limited understanding leads me to accept the following quote:

"As he [Fisher] points out, Mendel clearly had his hypothesis in mind before completing all his work and therefore rejected certain numerical ratios. It is also clear, as Fisher deduces, that Mendel did not classify all the pea plants and seeds he grew. Presumably he classified enough to convince himself that the result was as expected. It is perfectly natural under these circumstances to keep running totals as counts are made. If, then, one stops when the ratio "looks good", statistically the result will be biased in favor of the hypothesis. A seemingly "bad" fit may be perfectly plausible statistically, but one may not think so and add more data to see if it improves, thereby raising interesting questions, some mathematical and some psychological."
[Beadle (1967: 338)]
http://www.mendelweb.org/MWsapp.html

Ray wrote:

No Kevin, nothing like that.

Mendel just committed the 'no no' of suggesting a bigger sample of data was used.  Not so much by fact of actual suggestion but by inferance.

Probably best to give you the full quote and reference.

From: A.Kohn, "False Prophets" Basic Blackwood Ltd., Oxford 1986 p60.

quote: "Often recognised as the father of modern genetics.  His 1865 paper on inheritance in the garden pea was rediscovered in 1900.  Mendel's tabulations demonstrated statistical obedience to the laws of chance.  Traits such as roundness or colour were transmitted from generation to generation; combinations being reshuffled in each generation.  In 1936, Sir Ronald Fisher, replicating Mendel's work, concluded that the ratios suggested by Mendel indicated he stopped counting when he arrived at the expected and desired number."

end quote

Not a fraud, more of a tiny wiggle than a warp.
Though I suppose it depends upon how sharp the focus on ethics need be.  In the 19th century and early 20th, no big deal, but today it could definitely get you canned.  In any case, I see no record of Fisher's claims being tested in this extract from Kohn's book.